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Refitting Selected Crypto Funding Models for Holdout Predictions

Code Machine Learning for Trading

Summary

This notebook describes how to produce holdout predictions for a selected crypto perpetuals funding strategy. It resolves the configuration from validation results, carries its checkpoint choice forward, and builds a new training specification using data that ends before the holdout window. A label buffer prevents training outcomes from extending into that window, and the notebook checks that the resulting training identity differs from the validation fit.

It also inspects registered holdout prediction generations and identifies whether each underlying model was refitted for the holdout. This establishes that predictions were generated by a pre-window refit of the validation-selected configuration, but it does not assess their quality: the predictions are not scored, sized, or converted into trades here. The document also notes that repeating holdout evaluation can weaken the meaning of an unseen period, even when the configuration is chosen using validation alone.

Key ideas

  • Choose the holdout configuration using validation results without feeding holdout numbers back into selection.
  • Refit the selected model on history ending before the holdout and enforce a label horizon buffer.
  • Carry the selected checkpoint into the holdout refit so the evaluated model matches the selected configuration.
  • Verify refitting through the training identity and inspect existing generations for validation-fitted models.
  • Predictions alone do not establish strategy performance until they are scored and traded.

Tags

Full text
# 17_holdout_predictions.py


```py
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# %% [markdown]
# # Crypto Perpetuals Funding: Holdout Predictions
#
# **Chapter 20 - Out-of-sample evaluation**
#
# Every number this case study has reported was measured on the validation folds, and every
# choice was made by looking at them: the label, the model family, the entry rule, the
# allocator, the risk control. A result selected that way cannot also be the evidence that
# the selection was sound, because the ranking and the evidence would be the same
# measurement.
#
# The holdout is the window nothing has been selected on. This notebook fits the selected
# configuration on the history that ends before that window opens and writes its predictions
# over it. [`18_holdout_backtest`](18_holdout_backtest.ipynb) turns those predictions into a
# return series with the sizing and the overlay the case study settled on, and
# [`19_strategy_analysis`](19_strategy_analysis.ipynb) reads both back.
#
# **What this notebook is careful about**
#
# A holdout prediction is not the validation model scored on a later window. Section 3 fits
# again, and the new training identity is what makes the refit visible rather than asserted:
# a run that came back with the validation training hash would mean no refit happened, and
# it raises.
#
# **Prerequisites:** [`16_costs`](16_costs.ipynb), which is the last stage that could still
# move the selection.
#
# **Scope:** one training run and one prediction set. No backtest, no selection, no
# comparison - those are 18 and 19.

# %%
"""Crypto Perpetuals Funding: Holdout Predictions."""

import sqlite3

import polars as pl

from case_studies.research import open_study
from case_studies.research.holdout import build_holdout_training_spec
from case_studies.research.models import reconstruct_locked_model_request
from case_studies.utils.registry import training_hash_from_spec
from case_studies.utils.registry.maintenance import delete_prediction_generation
from case_studies.utils.strategy_analysis import (
    resolve_solvent_carrier,
    training_run_fitted_for_the_holdout,
)
from case_studies.utils.warning_policy import apply_notebook_warning_policy
from utils.paths import get_case_study_dir

apply_notebook_warning_policy()

# %% tags=["parameters"]
CASE_STUDY_ID = "crypto_perps_funding"
EXECUTION_TIER = "canonical"
WORKSPACE: str = ""
# Whether a holdout generation for a DIFFERENT configuration may be superseded by this run.
# Off by default: see section 3.
#
# The flag exists because the holdout is not a one-shot resource. What the rule against
# consulting the holdout forbids is SELECTING on it: the configuration evaluated here is
# chosen by validation Sharpe across the signal, allocation and risk stages, and no holdout
# number feeds back into that choice. It says nothing about how many times the evaluation
# may be computed, and a wrong result is deleted and re-run rather than left standing because
# it was observed. The guard below is against something narrower and real: two generations
# readable at once, so nobody downstream has to choose between them and nobody can quote
# whichever number they prefer.
REPLACE_HOLDOUT = False

# %%
study = open_study(CASE_STUDY_ID, execution_tier=EXECUTION_TIER, workspace=WORKSPACE or None)
CASE_DIR = get_case_study_dir(CASE_STUDY_ID)


def _registered_holdout_generations(case_dir):
    """Every holdout prediction set in the registry, and whether its model was refitted.

    ``refitted`` is read from the training run's own CV rather than from the prediction
    set's split: the split says where the predictions land, and a model fitted on the
    validation folds can publish predictions over the holdout window. Reading the split
    alone would call that a holdout evaluation.
    """
    with sqlite3.connect(str(case_dir / "run_log" / "registry.db")) as conn:
        rows = conn.execute(
            """
            SELECT p.prediction_hash, p.training_hash, p.checkpoint_kind, p.checkpoint_value,
                   t.config_name, t.spec_json
            FROM prediction_sets p
            JOIN training_runs t ON t.training_hash = p.training_hash
            WHERE p.split = 'holdout'
            ORDER BY p.prediction_hash
            """
        ).fetchall()
    return [
        {
            "prediction_hash": prediction_hash,
            "training_hash": training_hash,
            # The checkpoint is part of the configuration, not a detail of it. Identity on
            # the training hash alone would read two checkpoints of one run as the same
            # generation and let both stand.
            "checkpoint": (checkpoint_kind, checkpoint_value),
            "config_name": config_name,
            "refitted": training_run_fitted_for_the_holdout(training_spec_json),
        }
        for (
            prediction_hash,
            training_hash,
            checkpoint_kind,
            checkpoint_value,
            config_name,
            training_spec_json,
        ) in rows
    ]


# %% [markdown]
# ## 1. Which configuration the holdout runs
#
# The holdout runs the configuration the case study reports. `resolve_solvent_carrier`
# applies the selection rule this case study's funnel already implements: compare the
# registered validation backtests across the signal, allocation and risk stages, and take
# the highest Sharpe. It is resolved here rather than passed in from
# [`16_costs`](16_costs.ipynb), so the two agree by construction rather than by a hash
# copied between them.
#
# The two routes to that configuration were checked against each other rather than assumed
# to agree: this resolver and the `crypto-final-validation-{label}` candidate sets that
# [`15_risk_management`](15_risk_management.ipynb) freezes return the same backtest.
#
# Nothing about the holdout enters this choice. The selected configuration was fixed before this
# notebook ran.

# %%
carrier = resolve_solvent_carrier(CASE_STUDY_ID)
print(
    f"Selected configuration: {carrier['val_backtest_hash']}  stage={carrier['val_stage']}  "
    f"family={carrier['family']}  config={carrier['config_name']}  "
    f"label={carrier['label']}"
)
print(
    f"  validation Sharpe {carrier['val_sharpe']:.3f}, max drawdown {carrier['max_drawdown']:.3f}"
)
print(f"  fitted by training run {carrier['training_hash']}")

# %% [markdown]
# The checkpoint is part of the configuration. Families that checkpoint through training publish
# one prediction set per declared iteration, and the selected configuration's prediction set names
# one of them - so refitting without it would produce a model at the end of training rather than
# the one that was ranked. A family that checkpoints once carries nulls here, and passing them
# through unchanged is what keeps the lookup exact either way.

# %%
validation_prediction = study.results.open(carrier["val_prediction_hash"])
prediction_record = validation_prediction.registry_record()
CHECKPOINT_KIND = prediction_record["checkpoint_kind"]
CHECKPOINT_VALUE = prediction_record["checkpoint_value"]
print(f"Checkpoint: {CHECKPOINT_KIND}={CHECKPOINT_VALUE}")

# %% [markdown]
# ## 2. The window, and the model that is allowed to see it
#
# The holdout window is not a choice made here. It is `evaluation.holdout_start` and
# `evaluation.holdout_end` from this case study's own `setup.yaml` - 2024 and 2025 - read
# through the same `canonical_window` the fold derivation and the backtest slice both go
# through, so the three cannot disagree.
#
# The training interval is everything available before that window, bounded above by a label
# buffer. The buffer is what stops the last training label's outcome from resolving inside
# the holdout, and here it is a real horizon rather than a formality: these labels are
# forward returns over 8 and 24 hours, so a row observed at the last training timestamp is
# still unrealised for a full horizon after it. The derivation takes the widest declared
# horizon across the case study's labels and refuses to default it - a zero gap would be a
# leak, not a conservative choice.
#
# Everything else about the configuration is carried across unchanged, and the fields that
# cannot be - the eligibility manifest, and any parameter this family resolves from a fold's
# own training rows - are recomputed against the holdout fold. Carrying those forward would
# fit a model keyed to the validation folds and call it a retrain.

# %%
observation_timeline = (
    pl.read_parquet(study.root / "labels" / f"{carrier['label']}.parquet")
    .get_column("timestamp")
    .unique()
    .sort()
    .to_list()
)
validation_spec = study.results.open(carrier["training_hash"]).spec()
holdout_spec = build_holdout_training_spec(
    study,
    validation_spec,
    timeline=observation_timeline,
    case_study=CASE_STUDY_ID,
)

fold = holdout_spec["computation"]["cv"]["folds"][0]
print(f"Holdout fold {fold['fold']}")
print(f"  trains  {fold['train_start']} -> {fold['train_end']}")
print(f"  predicts {fold['val_start']} -> {fold['val_end']}")
print(f"  label buffer: {holdout_spec['computation']['cv']['request']['label_buffer']}")

# The validation folds are what the buffer is measured against, and the last of them ends
# before the holdout opens. Printing both is what lets a reader check the gap rather than
# take it on the derivation's word.
validation_folds = validation_spec["computation"]["cv"]["folds"]
latest_validation_end = max(str(entry["val_end"]) for entry in validation_folds)
print(f"Validation folds: {len(validation_folds)}, latest evaluation end {latest_validation_end}")
print(f"Holdout training ends {fold['train_end']}, holdout opens {fold['val_start']}")

# %% [markdown]
# ## 3. Fit, and register the predictions
#
# `reconstruct_locked_model_request` builds the request from the spec above. Its name comes
# from a locked holdout path this case study does not use; it takes a training specification
# and a checkpoint, not a lock, and it is used here because it is the one call that refuses a
# request that is not exactly the spec it was handed - the training identity, the checkpoint
# schedule, the feature lineage and the runtime parameters are all checked before anything is
# fitted.
#
# The training identity below is new. It has to be: it covers the CV interval, and the
# holdout fold is not one of the validation folds. A run that came back with the validation
# training hash would mean the refit did not happen, and the check after it raises.
#
# **The window carries one configuration at a time.** The holdout is re-runnable, and that is
# not the same as free: every configuration evaluated on it is another look at a period the
# case study reports as unseen, and two evaluated quietly would make that report false.
#
# So the check below is on the selected configuration rather than on the notebook, and it has
# exactly two outcomes. With the selected configuration unchanged this is an idempotent replay: the
# derivation is deterministic and the training identity covers it, so the same identity comes back
# and the fit is served from the registry. With the selected configuration changed it refuses,
# names both configurations, and stops.
#
# `REPLACE_HOLDOUT` is the only way past that, and it is a replacement rather than an
# addition: the superseded generation's rows are deleted, so the registry never holds two
# refits of the holdout window and no downstream resolver has to choose between them.

# %%
holdout_training_hash = training_hash_from_spec(holdout_spec)
this_generation = (holdout_training_hash, (CHECKPOINT_KIND, CHECKPOINT_VALUE))
superseded = [
    row
    for row in _registered_holdout_generations(CASE_DIR)
    if row["refitted"] and (row["training_hash"], row["checkpoint"]) != this_generation
]
if superseded and not REPLACE_HOLDOUT:
    raise RuntimeError(
        "the holdout window already carries a refit of a different configuration: "
        + ", ".join(
            f"{row['prediction_hash']} ({row['config_name']}, training {row['training_hash']})"
            for row in superseded
        )
        + f". This run would evaluate {carrier['config_name']} (training "
        f"{holdout_training_hash}, checkpoint {CHECKPOINT_KIND}={CHECKPOINT_VALUE}) on the "
        "same window. Set REPLACE_HOLDOUT=True to discard the earlier generation, or leave "
        "the selection where it was."
    )
for row in superseded:
    print(f"REPLACING holdout generation {row['prediction_hash']} ({row['config_name']})")
    # The rows go rather than being marked: a superseded holdout evaluation that is still
    # readable is still a number someone can quote, and the point of replacing it is that it
    # should not be one. `delete_prediction_generation` derives the child tables from
    # `PRAGMA foreign_key_list` rather than listing them, so a table added to the schema
    # later is covered without an edit, and it enables foreign keys on its own connection -
    # SQLite leaves them off per connection, which is the only reason a delete that misses a
    # child table appears to succeed.
    removed = delete_prediction_generation(
        CASE_DIR / "run_log" / "registry.db", row["prediction_hash"]
    )
    print(f"  removed {sum(removed.values())} rows: {removed}")

# %% tags=["results"]
request = reconstruct_locked_model_request(
    study,
    holdout_spec,
    checkpoint_kind=CHECKPOINT_KIND,
    checkpoint_value=CHECKPOINT_VALUE,
)
model_run = request.run()
holdout_prediction = model_run.predictions[0]

if model_run.training.hash == carrier["training_hash"]:
    raise RuntimeError(
        "the holdout refit produced the validation training identity "
        f"{carrier['training_hash']}, which means it did not refit"
    )
print(f"Holdout training run:  {model_run.training.hash}")
print(f"Holdout prediction set: {holdout_prediction.hash}")

# %% [markdown]
# What the prediction set covers, read back from the registry rather than from the request.
# The two agree only if the fit published what it declared, and the counts are what a reader
# can check the window against: perpetual funding settles every eight hours, so two years is
# on the order of two thousand decision timestamps, and the row count is those timestamps
# times the names eligible at each. The panel is unbalanced - assets enter at listing - so
# the name count is an upper bound rather than a constant.

# %% tags=["results"]
record = holdout_prediction.registry_record()
predictions = holdout_prediction.load()
print(
    f"split={record['split']}  checkpoint={record['checkpoint_kind']}={record['checkpoint_value']}"
)
print(f"rows={predictions.height:,}  timestamps={predictions['timestamp'].n_unique():,}")
print(
    f"  {predictions['timestamp'].min()} -> {predictions['timestamp'].max()}, "
    f"{predictions['symbol'].n_unique():,} names"
)

# %% [markdown]
# Every holdout prediction set the registry holds, and whether the model behind it was
# fitted for this window. Both are listed rather than one silently preferred: the registry is
# immutable, and a reader looking at it later sees whatever is there.

# %% tags=["results"]
for row in _registered_holdout_generations(CASE_DIR):
    note = (
        "refitted for the holdout" if row["refitted"] else "VALIDATION-FITTED - not out of sample"
    )
    print(
        f"  {row['prediction_hash']}  training={row['training_hash']}  {row['config_name']}  {note}"
    )

# %% [markdown]
# ## What this notebook establishes, and what it does not
#
# It establishes one thing: a prediction set over the holdout window, produced by the
# configuration this case study selected, fitted on data that ends before the window opens.
# That is a precondition for an out-of-sample claim, not the claim itself. Nothing here says
# whether the predictions are any good - they have not been scored, sized or traded.
#
# It does not make the holdout a fresh test in the strict sense. The configuration reached
# this notebook through a selection made on the validation folds, and this window is being
# used once per configuration that gets here. What it does remove is the specific
# circularity of scoring a validation-fitted model on the period meant to judge it.
#
# The holdout is re-runnable. If a later pass finds the selection was wrong, the answer is to
# delete this generation and produce another, not to treat the first as spent.
#
# **Next:** [`18_holdout_backtest`](18_holdout_backtest.ipynb).

```

Shown in full with attribution under the source's licence. Licence: MIT

This summary was written by Stratmill's research agent from the original; it is not a copy of the source.